Module 2: Financing a Clinic
Sustainability is Key
Successful school-based clinic financing is based on multiple factors. This often consists of a diverse portfolio of funding types, including:
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Billing revenue
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Other public (or private) funding
Billing insurance is the #1 way to bring in revenue for school-based clinics. Resources below may help clinics in getting organized on billing or supporting patients with enrollment into insurance or payments.
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Medicaid / HealthFirst Colorado -- Colorado Department of Health Care Policy and Financing (HCPF) oversees HealthFirst Colorado, the state's Medicaid program. Colorado contracts with Regional Accountable Entities (RAEs) to manage Medicaid locally. A relationship with the RAE(s) serving your patient population is key to success. Know who your RAE contact is, what supports are available, and contract details specific to your clinic to support revenue. School-based clinics are encouraged to support patients, directly or through referral, with Medicaid enrollment processes. Partnerships with your RAE can further enhance your ability to help families enroll.
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Billing Manuals -- HCPF maintains billing manuals for a variety of service focus areas. All manuals can be access through HCPF's website. A few with high relevance to school-based clinics are linked below.
- ​​State Behavioral Health Services Billing Manual (updated July 2025)
- For behavioral health billing and coding questions, providers should contact their RAE:
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RAE 1 - Rocky Mountain Health Partners (RMHP)
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RAE 2/4 - Northeast Health Partners (NHP) and Health Colorado, Inc. (HCI)
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RAE 3/5 - Colorado Access (COA)
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RAE 6/7 - Colorado Community Health Alliance (CCHA)
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Contact HCPF for general questions related to existing content in the billing manual
- For behavioral health billing and coding questions, providers should contact their RAE:
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​Telemedicine and eConsult (updated June 2025)
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Screening, Brief Intervention and Referral to Treatment (SBIRT) Program (updated May 2025)
- ​​State Behavioral Health Services Billing Manual (updated July 2025)
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Cover All Coloradans -- a Medicaid/CHP+ program available for immigrant pregnant people and children without documentation as January 1, 2025.​
Connect for Health Colorado is the state’s private plan marketplace with premium assistance for qualifying individuals
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OmniSalud is a connection to private plans for individuals without documentation
Billing for confidential services -- Many clinics have to consider how to maintain patient confidentiality while delivering services. This document is a ​suggestion on how to handle billing in these situations.
Exemptions for copays & deductibles -- Colorado law exempts school-based clinics from having to collect copayments and deductibles before billing insurance. This document reviews the law and considerations for clinics.
Billing Revenue
Other Funding Sources
Listed below are public funding sources clinics may want to consider for their program:
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School Based-Health Center Program, Colorado Department of Public Health and Environment – general operating and planning grants available regularly
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Colorado Primary Care Fund, Colorado Department of Healthcare Policy and Financing – funding to support clinics that serve uninsured who may not qualify for any other program
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​Colorado Indigent Care Program (CICP), Colorado Department of Healthcare Policy and Financing – discount care program for qualifying individuals will end July 1, 2025. This fact sheet from HCPF provides more detail.
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Outside of public funding, local and statewide private foundations may also be a resource. Please check with Youth Healthcare Alliance staff to get the most current ideas and connections.

Managing a Clinic
There are specific nuances that make managing a school-based clinic different than running other types of health clinics. While all require similar skills and knowledge, school-based clinics are located on school grounds and are youth-serving, so a working knowledge of HIPAA and FERPA requirements, minor consent laws, and engagement with schools and school districts are necessary. It is also critical to promote safe, inclusive spaces to receive care, which begins with management structures. Resources in this module include:
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Clinic welcome packet
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Quality standards and clinic menu of services
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Patient privacy, confidentiality, HIPAA/FERPA
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Marketing, recruitment, and retention
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Evaluations